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    Home » Gluten Free Muffins & Cupcakes » Gluten Free Blackberry Muffins

    Gluten Free Blackberry Muffins

    Published: Dec 24, 2023 · Modified: May 14, 2025 by Dalya Rubin · This post may contain affiliate links,

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    These easy & quick 10-ingredient Gluten Free Blackberry Muffins are the best gluten free breakfast muffin, filled with fresh blackberries & healthy ingredients. Prepare these dairy-free fluffy and tender muffins in under 15 minutes!

    gluten free blackberry muffins in brown paper liners with a bite taken

    Serve these muffins at a breakfast or brunch spread along with my Summer Fennel Salad with Melon and Gluten Free Penne Al Salmone an incredible well-rounded meal!

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    Why you'll love this recipe

    Move aside banana muffins and blueberry muffins, this Blackberry Muffin recipe is a new favorite! Prepared in bakery-style paper-liners, these Blackberry Muffins are moist and stay soft for days on end while also being gluten free!

    They are also a great way to add some fresh berries into your kids breakfast or snacks!

    Jump to:
    • Why you'll love this recipe
    • Ingredients
    • How to make the best gluten-free blackberry muffins
    • Recipe substitutions
    • Variations
    • Storage
    • More muffin recipes
    • Gluten Free Blackberry Muffins
    • Questions & Reviews

    Ingredients

    gluten free blackberry muffin ingredients in small glass bowls
    • Gluten free oat flour - Oat flour is a wonderful healthy gluten free flour that is packed with protein and works really well to add the perfect texture to these muffins.
    • Baking powder, Cinnamon and Salt
    • Coconut sugar - A healthier sweetener!
    • Greek Yogurt - I love using a dairy-free greek yogurt such as KiteHill, but dairy yogurt will definitely work perfectly too.
    • Oat Milk - You can also use any other full-fat nut milk or dairy milk.
    • Eggs
    • Refined coconut oil - Refined coconut oil doesn't have a coconut flavor but works perfectly as a healthier oil option.
    • Vanilla extract
    • Fresh Blackberries - Halving the blackberries gives these muffins beautiful spots of the blackberry color without it bleeding into the muffin and turning the muffin blue.

    How to make the best gluten-free blackberry muffins

    dry ingredients mixed in a white bowl
    dry ingredients fully mixed in a white bowl

    Step one: In a large mixing bowl add the at oat flour, baking powder, cinnamon, salt and coconut sugar. 

    Step two: Whisk the dry ingredients together until well combined.

    eggs and yogurt added to the gluten free blackberry muffin batter
    gluten free blackberry muffin batter made in a white bowl

    Step three: Make a well in the center of the dry ingredients with a spoon. Then add the greek yogurt, oat milk, eggs, melted coconut oil and vanilla extract.

    Step four: Whisk everything together until a batter forms. Allow the batter to sit for 5 minutes to thicken!

    blackberries added to the gluten free muffin batter
    gluten free blackberry muffin batter added to muffin tin

    Step five: Fold in the halved blackberries. Be careful not to over mix so the batter doesn't turn blue.

    Step six: Scoop the batter into a 12-cup muffin tin lined with paper muffin liners.

    baked gluten free blackberry muffins in a muffin tin

    Step seven- Bake muffins at 425°F for 5 minutes to help them puff up fast. Then reduce the oven temperature to 350°F and bake for 18-20 minutes. A toothpick inserted into the center should come out clean once the muffins are ready!

    Recipe substitutions

    • You can swap the coconut sugar with half granulated sugar and half brown sugar. I haven't tried it but it should work well!
    • Feel free to use any type of milk you like that is creamy, such as dairy whole milk, cashew milk or even canned coconut milk.
    • Use avocado oil instead of the coconut oil.
    • You can use frozen blackberries as long as they are added to the batter straight from the freezer, so they don't have time to defrost before baking.

    Variations

    • Lemon Blackberry Muffins - Add 2 teaspoons of lemon zest to the batter along with 2 tablespoons of lemon juice. Reduce the oat milk by 2 tablespoons so there isn't too much liquid in the batter!
    • Banana Blackberry Muffins - Substitute the greek yogurt with mashed banana. The texture may be different, but the muffin should still be delicious.
    • Crumb Blackberry Muffins - Add your favorite crumb streusel topping to the muffins before baking.
    • Mixed Berry Muffins - Swap half of the blackberries with raspberries!
    • Lemon Glaze - Once the muffins are cooked and cooled, drizzle a homemade lemon glaze over the muffins.

    See all my muffin recipes on IRF!

    gluten free blackberry muffin with bite taken out

    Storage

    • You can store these muffins in a large ziplock bag on the counter for 2-3 days. Alternately, store these muffins in the fridge for up to 1 week.
    • These muffins are freezer friendly too! Seal in a freezer safe bag for up to 3 months. When ready to defrost, please the bag from the freezer onto the counter and allow to thaw overnight.
    gluten free blackberry muffins on a wire rack

    More muffin recipes

    • Banana Blackberry Oatmeal Muffin on a white small plate
      Banana Blackberry Oatmeal Muffins 
    • pumpkin oat flour muffins in a bowl with a tea towel
      Easy Pumpkin Oat Flour Muffins – Gluten Free
    • Apple Pie Honey Cupcakes Wilton
      Apple Pie Honey Cupcakes with Cream Cheese Frosting
    • gluten free apple muffins stacked with bite taken out
      Gluten Free Apple Muffins with Crumb Topping

    Have you tried this recipe? Consider leaving a ⭐️⭐️⭐️⭐️⭐️ rating in the recipe card right below and/or a review in the comment section further down the page? Thanks for visiting!

    gluten free blackberry muffins in paper liners

    Gluten Free Blackberry Muffins

    These easy 10-ingredient Gluten Free Blackberry Muffins are the best gluten free breakfast muffin prepared in under 15 minutes!
    5 from 6 votes
    Print Pin Rate
    Prep Time: 15 minutes minutes
    Cook Time: 18 minutes minutes
    Servings: 12 muffins
    Calories: 208kcal
    Author: Dalya Rubin

    Ingredients

    • 1 ½ cups gluten free oat flour spooned and leveled (150 grams)
    • 2 teaspoons baking powder
    • ½ teaspoon ground cinnamon
    • ¼ teaspoon salt
    • ¾ cup coconut sugar (105 grams)
    • ½ cup whole Greek Yogurt I prefer dairy-free version; Kite Hill Greek Yogurt is excellent here)
    • ⅓ cup full fat oat milk (use Oatly Full Fat for recipe testing)
    • 3 large eggs at room temperature
    • ½ cup refined coconut oil melted (100 grams)
    • 2 teaspoons pure vanilla extract
    • 10 ounces fresh blackberries rinsed and patted dry with paper towels and cut in half lengthwise

    Instructions

    • Preheat the oven to 425°F and grease or line a 12-count muffin tin with cupcake liners. If using a silicone muffin tin, grease with cooking spray.
    • In a large bowl, whisk together the oat flour, baking powder, cinnamon, salt and coconut sugar.
    • Use a spoon to make a well in the center of the dry ingredients. Add greek yogurt, oat milk, eggs, melted coconut oil and vanilla extract. Whisk until a batter forms.
    • Let the batter sit for 5 minutes to thicken.
    • Fold the halved blackberries into the batter, just until combined.
    • Scoop about ⅓ cup batter into each muffin liner.
    • Bake muffins for 5 minutes at 425°F, then lower the oven temperature to 350°F and bake for an additional 18-20 minutes or until a toothpick inserted into the center of the muffin comes out clean.
    • Allow muffins to cool for 15 minutes before removing from the pan and setting onto a wire cooling rack. Cool muffins completely before storing.

    Notes

    • Easily double this recipe to make 24 muffins! 
    • Storage: You can keep these muffins in a ziplock on the counter for 2-3 days, or refrigerate for 1 week. Alternatively, freeze in a sealed container or bag and defrost in the fridge overnight. 
    • Oat Milk substitutions: Use any other full fat nut milk you like. 
    • Make sure to follow the bake temperatures and times to the T for the perfectly baked muffins every time. 

    Nutrition

    Serving: 1muffin | Calories: 208kcal | Carbohydrates: 22g | Protein: 5g | Fat: 12g | Saturated Fat: 8g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 1g | Trans Fat: 0.01g | Cholesterol: 47mg | Sodium: 166mg | Potassium: 128mg | Fiber: 2g | Sugar: 9g | Vitamin A: 132IU | Vitamin C: 5mg | Calcium: 81mg | Iron: 1mg
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    Comments

    1. Helen at the Lazy Gastronome says

      January 03, 2024 at 10:35 pm

      5 stars
      These muffins are so full of flavor! Blackberries grow wild here so I’m always looking for something new to make. This is one for sure!

      Reply
    2. Alexandra says

      January 04, 2024 at 3:32 am

      5 stars
      These muffins are simple to prepare, bursting with delicious fruit and are ideal to go alongside my morning coffee. Thanks for the great recipe.

      Reply
    3. nancy says

      January 06, 2024 at 1:43 am

      5 stars
      loved how moist and soft these muffins were! totally made my morning

      Reply
    4. Lathiya says

      January 16, 2024 at 9:14 am

      5 stars
      I made a batch of these blackberry muffins last week and it was devoured by everyone in the family. Going to bake again.

      Reply

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